STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtnX2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase. (224 aa)    
Predicted Functional Partners:
mtnW
2,3-diketo-5-methylthiopentyl-1-phosphate enolase.
  
 
 0.913
clpC_1
ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family.
  
    0.824
fucA
L-fuculose phosphate aldolase.
  
  
 0.780
mdeA_1
Methionine gamma-lyase.
   
    0.558
phoR_8
Alkaline phosphatase synthesis sensor protein PhoR.
  
     0.472
yitJ_4
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase.
   
    0.453
mccB
Cystathionine gamma-lyase.
   
    0.445
mdeA_2
Methionine gamma-lyase.
   
    0.445
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
 
  
 0.433
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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