STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloB_1Hydroxyacylglutathione hydrolase. (299 aa)    
Predicted Functional Partners:
cdr
Coenzyme A disulfide reductase.
  
 0.975
KPU44547.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
 0.975
gloA_1
Lactoylglutathione lyase.
    
 0.753
gloA_2
Lactoylglutathione lyase.
    
  0.710
KPU45964.1
DegV domain-containing protein.
       0.678
vanH
D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.672
KPU43571.1
Putative FAD-linked oxidoreductase.
    
 0.655
pspE_1
Thiosulfate sulfurtransferase PspE precursor.
  
 0.634
exoA
Exodeoxyribonuclease.
       0.631
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.525
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.