Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU45807.1 | KPU45808.1 | OXPF_05960 | OXPF_05970 | Helix-turn-helix protein. | Hypothetical protein. | 0.773 |
KPU45807.1 | KPU45809.1 | OXPF_05960 | OXPF_05980 | Helix-turn-helix protein. | Hypothetical protein. | 0.566 |
KPU45807.1 | immA | OXPF_05960 | OXPF_05940 | Helix-turn-helix protein. | Metallopeptidase ImmA. | 0.497 |
KPU45807.1 | xre_2 | OXPF_05960 | OXPF_05950 | Helix-turn-helix protein. | HTH-type transcriptional regulator Xre. | 0.490 |
KPU45808.1 | KPU45807.1 | OXPF_05970 | OXPF_05960 | Hypothetical protein. | Helix-turn-helix protein. | 0.773 |
KPU45808.1 | KPU45809.1 | OXPF_05970 | OXPF_05980 | Hypothetical protein. | Hypothetical protein. | 0.566 |
KPU45808.1 | immA | OXPF_05970 | OXPF_05940 | Hypothetical protein. | Metallopeptidase ImmA. | 0.496 |
KPU45808.1 | xre_2 | OXPF_05970 | OXPF_05950 | Hypothetical protein. | HTH-type transcriptional regulator Xre. | 0.485 |
KPU45809.1 | KPU45807.1 | OXPF_05980 | OXPF_05960 | Hypothetical protein. | Helix-turn-helix protein. | 0.566 |
KPU45809.1 | KPU45808.1 | OXPF_05980 | OXPF_05970 | Hypothetical protein. | Hypothetical protein. | 0.566 |
immA | KPU45807.1 | OXPF_05940 | OXPF_05960 | Metallopeptidase ImmA. | Helix-turn-helix protein. | 0.497 |
immA | KPU45808.1 | OXPF_05940 | OXPF_05970 | Metallopeptidase ImmA. | Hypothetical protein. | 0.496 |
immA | xre_2 | OXPF_05940 | OXPF_05950 | Metallopeptidase ImmA. | HTH-type transcriptional regulator Xre. | 0.823 |
xre_2 | KPU45807.1 | OXPF_05950 | OXPF_05960 | HTH-type transcriptional regulator Xre. | Helix-turn-helix protein. | 0.490 |
xre_2 | KPU45808.1 | OXPF_05950 | OXPF_05970 | HTH-type transcriptional regulator Xre. | Hypothetical protein. | 0.485 |
xre_2 | immA | OXPF_05950 | OXPF_05940 | HTH-type transcriptional regulator Xre. | Metallopeptidase ImmA. | 0.823 |