STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU45822.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
KPU45816.1
Hypothetical protein.
  
  
 0.828
KPU45820.1
Hypothetical protein.
  
    0.825
KPU45819.1
Hypothetical protein.
       0.797
KPU45817.1
LysM domain protein.
       0.796
KPU45821.1
Baseplate J-like protein.
       0.796
KPU45818.1
Hypothetical protein.
       0.791
KPU45826.1
Hypothetical protein.
 
    0.778
KPU45825.1
Hypothetical protein.
  
  
 0.769
KPU45823.1
Hypothetical protein.
       0.737
KPU45824.1
Hypothetical protein.
       0.736
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.