STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrR_1Organic hydroperoxide resistance transcriptional regulator. (149 aa)    
Predicted Functional Partners:
slyA_1
Transcriptional regulator SlyA.
  
     0.764
ohrR_5
Organic hydroperoxide resistance transcriptional regulator.
  
     0.685
KPU45488.1
Putative multidrug export ATP-binding/permease protein.
 
   
 0.668
marR
Multiple antibiotic resistance protein MarR.
  
     0.646
ohrR_2
Organic hydroperoxide resistance transcriptional regulator.
  
     0.634
KPU45489.1
Putative ABC transporter ATP-binding protein.
     
 0.623
KPU46115.1
DNA-binding transcriptional repressor MarR.
  
     0.564
opuCC
Carnitine transport binding protein OpuCC precursor.
  
  
 0.508
pknB
Serine/threonine-protein kinase PknB.
  
 
 0.458
KPU45486.1
Hypothetical protein.
       0.455
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.