STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpQ1Putative glycerophosphoryl diester phosphodiesterase 1. (324 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.826
bcrC
Undecaprenyl-diphosphatase BcrC.
 0.810
KPU44811.1
Lysophospholipase L2.
 
  
 0.726
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.650
yihX
alpha-D-glucose-1-phosphate phosphatase YihX.
  
 
 0.640
phoA_1
Alkaline phosphatase precursor; Belongs to the alkaline phosphatase family.
  
 
 0.631
phoA_2
Alkaline phosphatase 4 precursor; Belongs to the alkaline phosphatase family.
  
 
 0.631
gtaB_1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.627
KPU45513.1
Acetyltransferase (GNAT) family protein.
 
     0.624
KPU44433.1
Hypothetical protein.
     
 0.621
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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