STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yecSInner membrane amino-acid ABC transporter permease protein YecS. (216 aa)    
Predicted Functional Partners:
glnQ_2
Glutamine transport ATP-binding protein GlnQ.
 0.999
fliY_2
Cystine-binding periplasmic protein precursor.
 0.998
glnQ_1
Glutamine transport ATP-binding protein GlnQ.
 0.997
tcyN
L-cystine import ATP-binding protein TcyN.
 0.997
artM
Arginine transport ATP-binding protein ArtM.
 0.996
glnQ_5
Glutamine transport ATP-binding protein GlnQ.
 0.996
fliY_1
Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 0.995
fliY_3
Cystine-binding periplasmic protein precursor.
 0.988
tcyA
L-cystine-binding protein TcyA precursor; Belongs to the bacterial solute-binding protein 3 family.
 0.958
peb1A
Major cell-binding factor precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.904
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.