Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amt | glnB_2 | OXPF_35740 | OXPF_09230 | Ammonia channel precursor. | Nitrogen regulatory protein P-II. | 0.958 |
| amt | glnB_3 | OXPF_35740 | OXPF_09240 | Ammonia channel precursor. | Nitrogen regulatory protein P-II 1; Belongs to the P(II) protein family. | 0.969 |
| amt | nifH1_2 | OXPF_35740 | OXPF_09220 | Ammonia channel precursor. | Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.516 |
| amt | nifH1_3 | OXPF_35740 | OXPF_27850 | Ammonia channel precursor. | Nitrogenase iron protein 1; Belongs to the NifH/BchL/ChlL family. | 0.759 |
| amtB | glnB_2 | OXPF_02310 | OXPF_09230 | Ammonia channel precursor. | Nitrogen regulatory protein P-II. | 0.957 |
| amtB | glnB_3 | OXPF_02310 | OXPF_09240 | Ammonia channel precursor. | Nitrogen regulatory protein P-II 1; Belongs to the P(II) protein family. | 0.967 |
| amtB | nifH1_2 | OXPF_02310 | OXPF_09220 | Ammonia channel precursor. | Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.516 |
| amtB | nifH1_3 | OXPF_02310 | OXPF_27850 | Ammonia channel precursor. | Nitrogenase iron protein 1; Belongs to the NifH/BchL/ChlL family. | 0.759 |
| argB | glnB_2 | OXPF_03490 | OXPF_09230 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Nitrogen regulatory protein P-II. | 0.873 |
| argB | glnB_3 | OXPF_03490 | OXPF_09240 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Nitrogen regulatory protein P-II 1; Belongs to the P(II) protein family. | 0.873 |
| glnB_2 | amt | OXPF_09230 | OXPF_35740 | Nitrogen regulatory protein P-II. | Ammonia channel precursor. | 0.958 |
| glnB_2 | amtB | OXPF_09230 | OXPF_02310 | Nitrogen regulatory protein P-II. | Ammonia channel precursor. | 0.957 |
| glnB_2 | argB | OXPF_09230 | OXPF_03490 | Nitrogen regulatory protein P-II. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.873 |
| glnB_2 | glnB_3 | OXPF_09230 | OXPF_09240 | Nitrogen regulatory protein P-II. | Nitrogen regulatory protein P-II 1; Belongs to the P(II) protein family. | 0.967 |
| glnB_2 | nifB_3 | OXPF_09230 | OXPF_09280 | Nitrogen regulatory protein P-II. | FeMo cofactor biosynthesis protein NifB; Belongs to the NifD/NifK/NifE/NifN family. | 0.911 |
| glnB_2 | nifD_1 | OXPF_09230 | OXPF_09250 | Nitrogen regulatory protein P-II. | Nitrogenase molybdenum-iron protein alpha chain. | 0.955 |
| glnB_2 | nifD_2 | OXPF_09230 | OXPF_09270 | Nitrogen regulatory protein P-II. | Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family. | 0.920 |
| glnB_2 | nifH1_2 | OXPF_09230 | OXPF_09220 | Nitrogen regulatory protein P-II. | Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.876 |
| glnB_2 | nifH1_3 | OXPF_09230 | OXPF_27850 | Nitrogen regulatory protein P-II. | Nitrogenase iron protein 1; Belongs to the NifH/BchL/ChlL family. | 0.691 |
| glnB_2 | nifK_2 | OXPF_09230 | OXPF_09260 | Nitrogen regulatory protein P-II. | Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. | 0.958 |
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