STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_3Putative aliphatic sulfonates transport permease protein SsuC. (258 aa)    
Predicted Functional Partners:
tauB
Taurine import ATP-binding protein TauB.
 
 
 0.986
KPU45223.1
Putative thiamine biosynthesis protein.
 
 
 0.962
KPU43451.1
Putative thiamine biosynthesis protein.
 
 
 0.928
ssuB_3
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 
 0.919
ssuB_2
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 
 0.880
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 
 0.871
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
 
 
 0.868
cysA_3
Sulfate/thiosulfate import ATP-binding protein CysA.
 
 
 0.863
ssuA_2
Putative ABC transporter periplasmic binding protein precursor.
 
 
 0.859
cmpD_1
Bicarbonate transport ATP-binding protein CmpD.
 
 
 0.840
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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