STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU45254.1Cellulose synthase regulator protein. (242 aa)    
Predicted Functional Partners:
KPU45255.1
Cellulose synthase regulator protein.
     0.989
icaA
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
 
 0.966
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.962
KPU44433.1
Hypothetical protein.
   
 0.946
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.941
pknB
Serine/threonine-protein kinase PknB.
  
 0.894
KPU45261.1
endo-1,4-D-glucanase.
 
  
 0.888
KPU45258.1
GGDEF domain protein.
 
 
 0.883
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.878
KPU45259.1
Hypothetical protein.
 
   
 0.866
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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