Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU45065.1 | KPU45170.1 | OXPF_15430 | OXPF_12970 | Hypothetical protein. | Nucleotidyltransferase domain protein. | 0.460 |
KPU45065.1 | comC_2 | OXPF_15430 | OXPF_15440 | Hypothetical protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.913 |
KPU45065.1 | comC_3 | OXPF_15430 | OXPF_32260 | Hypothetical protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.702 |
KPU45168.1 | KPU45169.1 | OXPF_12950 | OXPF_12960 | Hypothetical protein. | Hypothetical protein. | 0.440 |
KPU45168.1 | KPU45170.1 | OXPF_12950 | OXPF_12970 | Hypothetical protein. | Nucleotidyltransferase domain protein. | 0.440 |
KPU45169.1 | KPU45168.1 | OXPF_12960 | OXPF_12950 | Hypothetical protein. | Hypothetical protein. | 0.440 |
KPU45169.1 | KPU45170.1 | OXPF_12960 | OXPF_12970 | Hypothetical protein. | Nucleotidyltransferase domain protein. | 0.970 |
KPU45170.1 | KPU45065.1 | OXPF_12970 | OXPF_15430 | Nucleotidyltransferase domain protein. | Hypothetical protein. | 0.460 |
KPU45170.1 | KPU45168.1 | OXPF_12970 | OXPF_12950 | Nucleotidyltransferase domain protein. | Hypothetical protein. | 0.440 |
KPU45170.1 | KPU45169.1 | OXPF_12970 | OXPF_12960 | Nucleotidyltransferase domain protein. | Hypothetical protein. | 0.970 |
KPU45170.1 | comC_2 | OXPF_12970 | OXPF_15440 | Nucleotidyltransferase domain protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.401 |
KPU45170.1 | comC_3 | OXPF_12970 | OXPF_32260 | Nucleotidyltransferase domain protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.452 |
KPU45170.1 | nifJ_2 | OXPF_12970 | OXPF_36080 | Nucleotidyltransferase domain protein. | Pyruvate-flavodoxin oxidoreductase. | 0.693 |
comC_2 | KPU45065.1 | OXPF_15440 | OXPF_15430 | Type 4 prepilin-like proteins leader peptide-processing enzyme. | Hypothetical protein. | 0.913 |
comC_2 | KPU45170.1 | OXPF_15440 | OXPF_12970 | Type 4 prepilin-like proteins leader peptide-processing enzyme. | Nucleotidyltransferase domain protein. | 0.401 |
comC_3 | KPU45065.1 | OXPF_32260 | OXPF_15430 | Type 4 prepilin-like proteins leader peptide-processing enzyme. | Hypothetical protein. | 0.702 |
comC_3 | KPU45170.1 | OXPF_32260 | OXPF_12970 | Type 4 prepilin-like proteins leader peptide-processing enzyme. | Nucleotidyltransferase domain protein. | 0.452 |
nifJ_2 | KPU45170.1 | OXPF_36080 | OXPF_12970 | Pyruvate-flavodoxin oxidoreductase. | Nucleotidyltransferase domain protein. | 0.693 |