Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU43478.1 | mshD_1 | OXPF_29190 | OXPF_13280 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.529 |
KPU43478.1 | nprA | OXPF_29190 | OXPF_23430 | Hypothetical protein. | Transcriptional activator NprA. | 0.508 |
KPU44852.1 | mshD_1 | OXPF_13270 | OXPF_13280 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.598 |
clgR | mshD_1 | OXPF_25300 | OXPF_13280 | Transcriptional regulator ClgR. | Mycothiol acetyltransferase. | 0.417 |
clgR | puuR | OXPF_25300 | OXPF_33590 | Transcriptional regulator ClgR. | HTH-type transcriptional regulator PuuR. | 0.542 |
htpX | mshD_1 | OXPF_43150 | OXPF_13280 | Protease HtpX. | Mycothiol acetyltransferase. | 0.475 |
mshD_1 | KPU43478.1 | OXPF_13280 | OXPF_29190 | Mycothiol acetyltransferase. | Hypothetical protein. | 0.529 |
mshD_1 | KPU44852.1 | OXPF_13280 | OXPF_13270 | Mycothiol acetyltransferase. | Hypothetical protein. | 0.598 |
mshD_1 | clgR | OXPF_13280 | OXPF_25300 | Mycothiol acetyltransferase. | Transcriptional regulator ClgR. | 0.417 |
mshD_1 | htpX | OXPF_13280 | OXPF_43150 | Mycothiol acetyltransferase. | Protease HtpX. | 0.475 |
mshD_1 | nprA | OXPF_13280 | OXPF_23430 | Mycothiol acetyltransferase. | Transcriptional activator NprA. | 0.490 |
mshD_1 | puuR | OXPF_13280 | OXPF_33590 | Mycothiol acetyltransferase. | HTH-type transcriptional regulator PuuR. | 0.417 |
mshD_1 | speH | OXPF_13280 | OXPF_13330 | Mycothiol acetyltransferase. | S-adenosylmethionine decarboxylase proenzyme precursor; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.484 |
mshD_1 | ybbH | OXPF_13280 | OXPF_13380 | Mycothiol acetyltransferase. | Putative HTH-type transcriptional regulator YbbH. | 0.444 |
nprA | KPU43478.1 | OXPF_23430 | OXPF_29190 | Transcriptional activator NprA. | Hypothetical protein. | 0.508 |
nprA | mshD_1 | OXPF_23430 | OXPF_13280 | Transcriptional activator NprA. | Mycothiol acetyltransferase. | 0.490 |
puuR | clgR | OXPF_33590 | OXPF_25300 | HTH-type transcriptional regulator PuuR. | Transcriptional regulator ClgR. | 0.542 |
puuR | mshD_1 | OXPF_33590 | OXPF_13280 | HTH-type transcriptional regulator PuuR. | Mycothiol acetyltransferase. | 0.417 |
speH | mshD_1 | OXPF_13330 | OXPF_13280 | S-adenosylmethionine decarboxylase proenzyme precursor; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | Mycothiol acetyltransferase. | 0.484 |
ybbH | mshD_1 | OXPF_13380 | OXPF_13280 | Putative HTH-type transcriptional regulator YbbH. | Mycothiol acetyltransferase. | 0.444 |