STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAEStage III sporulation protein AE precursor. (389 aa)    
Predicted Functional Partners:
KPU44918.1
Stage III sporulation protein AF (spore_III_AF).
 
  
 0.995
KPU44920.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.995
KPU44921.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.991
KPU44922.1
Stage III sporulation protein SpoAB.
 
  
 0.986
KPU44917.1
Hypothetical protein.
 
  
 0.985
KPU44923.1
Hypothetical protein.
 
  
 0.979
spoIIID
Stage III sporulation protein D.
  
    0.964
spoIIIAH
Stage III sporulation protein AH.
 
  
 0.936
spoIIM
Stage II sporulation protein M.
  
  
 0.854
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.817
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.