STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU44975.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.938
KPU44974.1
Glyoxalase-like domain protein.
 
   
 0.806
KPU44973.1
Putative metallophosphoesterase.
       0.752
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.741
KPU44972.1
Glyoxalase-like domain protein.
       0.690
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
 0.621
ywqF
UDP-glucose 6-dehydrogenase YwqF.
  
 
 0.609
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.609
epsL
Putative sugar transferase EpsL.
  
 
 0.609
gtaB_2
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.572
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.