STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU45048.1Hypothetical protein. (663 aa)    
Predicted Functional Partners:
KPU45049.1
Telomeric repeat-binding factor 2.
       0.714
KPU45050.1
Hypothetical protein.
       0.587
KPU45047.1
Hypothetical protein.
       0.551
KPU45046.1
Hypothetical protein.
       0.540
KPU45051.1
Hypothetical protein.
       0.479
KPU45052.1
Hypothetical protein.
       0.479
KPU45044.1
Hypothetical protein.
       0.452
KPU45045.1
Hypothetical protein.
       0.452
KPU45043.1
Double zinc ribbon.
       0.441
KPU45042.1
Hypothetical protein.
       0.423
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.