STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU45065.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
bag
IgA FC receptor precursor.
 
     0.916
comC_2
Type 4 prepilin-like proteins leader peptide-processing enzyme.
 
     0.913
rapA_2
RNA polymerase-associated protein RapA.
 
     0.890
KPU45064.1
Hypothetical protein.
 
     0.850
KPU45063.1
Hypothetical protein.
 
     0.829
KPU45073.1
Hypothetical protein.
 
     0.803
KPU45077.1
SAF domain protein.
 
     0.797
KPU45093.1
Hypothetical protein.
 
     0.795
KPU45074.1
Hypothetical protein.
 
     0.791
KPU43215.1
Hypothetical protein.
  
     0.744
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.