Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU45090.1 | KPU45091.1 | OXPF_15680 | OXPF_15690 | Type IV secretory system conjugative DNA transfer. | Hypothetical protein. | 0.952 |
KPU45090.1 | KPU45093.1 | OXPF_15680 | OXPF_15710 | Type IV secretory system conjugative DNA transfer. | Hypothetical protein. | 0.857 |
KPU45090.1 | rapA_2 | OXPF_15680 | OXPF_15390 | Type IV secretory system conjugative DNA transfer. | RNA polymerase-associated protein RapA. | 0.851 |
KPU45090.1 | spo0C_1 | OXPF_15680 | OXPF_15720 | Type IV secretory system conjugative DNA transfer. | Chromosome-partitioning protein Spo0J. | 0.799 |
KPU45091.1 | KPU45090.1 | OXPF_15690 | OXPF_15680 | Hypothetical protein. | Type IV secretory system conjugative DNA transfer. | 0.952 |
KPU45091.1 | KPU45093.1 | OXPF_15690 | OXPF_15710 | Hypothetical protein. | Hypothetical protein. | 0.859 |
KPU45091.1 | rapA_2 | OXPF_15690 | OXPF_15390 | Hypothetical protein. | RNA polymerase-associated protein RapA. | 0.757 |
KPU45091.1 | spo0C_1 | OXPF_15690 | OXPF_15720 | Hypothetical protein. | Chromosome-partitioning protein Spo0J. | 0.808 |
KPU45093.1 | KPU45090.1 | OXPF_15710 | OXPF_15680 | Hypothetical protein. | Type IV secretory system conjugative DNA transfer. | 0.857 |
KPU45093.1 | KPU45091.1 | OXPF_15710 | OXPF_15690 | Hypothetical protein. | Hypothetical protein. | 0.859 |
KPU45093.1 | dnaC_1 | OXPF_15710 | OXPF_34470 | Hypothetical protein. | Replicative DNA helicase. | 0.906 |
KPU45093.1 | dnaC_3 | OXPF_15710 | OXPF_36660 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.906 |
KPU45093.1 | dnaC_4 | OXPF_15710 | OXPF_39600 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.906 |
KPU45093.1 | nifJ_2 | OXPF_15710 | OXPF_36080 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.847 |
KPU45093.1 | polA | OXPF_15710 | OXPF_40400 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.884 |
KPU45093.1 | rapA_2 | OXPF_15710 | OXPF_15390 | Hypothetical protein. | RNA polymerase-associated protein RapA. | 0.847 |
KPU45093.1 | rph | OXPF_15710 | OXPF_04160 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.898 |
KPU45093.1 | spo0C_1 | OXPF_15710 | OXPF_15720 | Hypothetical protein. | Chromosome-partitioning protein Spo0J. | 0.844 |
dnaC_1 | KPU45093.1 | OXPF_34470 | OXPF_15710 | Replicative DNA helicase. | Hypothetical protein. | 0.906 |
dnaC_1 | polA | OXPF_34470 | OXPF_40400 | Replicative DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.461 |
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