STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macA_2Macrolide export protein MacA. (412 aa)    
Predicted Functional Partners:
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
  
 0.962
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.950
KPU43671.1
Outer membrane efflux protein.
 
 0.919
macB_6
Macrolide export ATP-binding/permease protein MacB.
 
  
 0.888
macB_7
Macrolide export ATP-binding/permease protein MacB.
 
  
 0.886
macB_8
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.809
macB_5
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.806
swrC
Swarming motility protein SwrC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.626
hssS
Heme sensor protein HssS.
  
  
 0.588
hssR_2
Heme response regulator HssR.
     
 0.581
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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