Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bmrR_1 | mta_1 | OXPF_03100 | OXPF_18640 | Multidrug-efflux transporter 1 regulator. | HTH-type transcriptional activator mta. | 0.639 |
| cph2_2 | gmr_3 | OXPF_17230 | OXPF_38300 | Phytochrome-like protein cph2. | Cyclic di-GMP phosphodiesterase Gmr. | 0.990 |
| cph2_2 | gmr_4 | OXPF_17230 | OXPF_41670 | Phytochrome-like protein cph2. | Cyclic di-GMP phosphodiesterase Gmr. | 0.868 |
| cph2_2 | mta_1 | OXPF_17230 | OXPF_18640 | Phytochrome-like protein cph2. | HTH-type transcriptional activator mta. | 0.469 |
| cph2_2 | pknB | OXPF_17230 | OXPF_31460 | Phytochrome-like protein cph2. | Serine/threonine-protein kinase PknB. | 0.955 |
| cph2_2 | zraS | OXPF_17230 | OXPF_30830 | Phytochrome-like protein cph2. | Sensor protein ZraS. | 0.963 |
| dnaJ_1 | mta_1 | OXPF_22910 | OXPF_18640 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | HTH-type transcriptional activator mta. | 0.541 |
| dnaJ_1 | pknB | OXPF_22910 | OXPF_31460 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Serine/threonine-protein kinase PknB. | 0.473 |
| dnaJ_2 | mta_1 | OXPF_30440 | OXPF_18640 | Chaperone protein DnaJ. | HTH-type transcriptional activator mta. | 0.541 |
| dnaJ_2 | pknB | OXPF_30440 | OXPF_31460 | Chaperone protein DnaJ. | Serine/threonine-protein kinase PknB. | 0.473 |
| dnaJ_2 | zraS | OXPF_30440 | OXPF_30830 | Chaperone protein DnaJ. | Sensor protein ZraS. | 0.424 |
| gltB_2 | gmr_3 | OXPF_35700 | OXPF_38300 | Ferredoxin-dependent glutamate synthase 1. | Cyclic di-GMP phosphodiesterase Gmr. | 0.735 |
| gltB_2 | gmr_4 | OXPF_35700 | OXPF_41670 | Ferredoxin-dependent glutamate synthase 1. | Cyclic di-GMP phosphodiesterase Gmr. | 0.415 |
| gltB_2 | mta_1 | OXPF_35700 | OXPF_18640 | Ferredoxin-dependent glutamate synthase 1. | HTH-type transcriptional activator mta. | 0.788 |
| gltB_2 | pknB | OXPF_35700 | OXPF_31460 | Ferredoxin-dependent glutamate synthase 1. | Serine/threonine-protein kinase PknB. | 0.665 |
| gltB_2 | rpoB | OXPF_35700 | OXPF_38160 | Ferredoxin-dependent glutamate synthase 1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.608 |
| gltB_2 | zraS | OXPF_35700 | OXPF_30830 | Ferredoxin-dependent glutamate synthase 1. | Sensor protein ZraS. | 0.754 |
| gmr_3 | cph2_2 | OXPF_38300 | OXPF_17230 | Cyclic di-GMP phosphodiesterase Gmr. | Phytochrome-like protein cph2. | 0.990 |
| gmr_3 | gltB_2 | OXPF_38300 | OXPF_35700 | Cyclic di-GMP phosphodiesterase Gmr. | Ferredoxin-dependent glutamate synthase 1. | 0.735 |
| gmr_3 | gmr_4 | OXPF_38300 | OXPF_41670 | Cyclic di-GMP phosphodiesterase Gmr. | Cyclic di-GMP phosphodiesterase Gmr. | 0.996 |
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