Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU45863.1 | clgR | OXPF_03310 | OXPF_25300 | Putative acetyltransferase. | Transcriptional regulator ClgR. | 0.417 |
KPU45863.1 | puuR | OXPF_03310 | OXPF_33590 | Putative acetyltransferase. | HTH-type transcriptional regulator PuuR. | 0.417 |
KPU45863.1 | ywnH_2 | OXPF_03310 | OXPF_19220 | Putative acetyltransferase. | Putative phosphinothricin acetyltransferase YwnH. | 0.673 |
clgR | KPU45863.1 | OXPF_25300 | OXPF_03310 | Transcriptional regulator ClgR. | Putative acetyltransferase. | 0.417 |
clgR | puuR | OXPF_25300 | OXPF_33590 | Transcriptional regulator ClgR. | HTH-type transcriptional regulator PuuR. | 0.542 |
clgR | ywnH_2 | OXPF_25300 | OXPF_19220 | Transcriptional regulator ClgR. | Putative phosphinothricin acetyltransferase YwnH. | 0.417 |
doeB | ywnH_2 | OXPF_20410 | OXPF_19220 | N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase. | Putative phosphinothricin acetyltransferase YwnH. | 0.433 |
puuR | KPU45863.1 | OXPF_33590 | OXPF_03310 | HTH-type transcriptional regulator PuuR. | Putative acetyltransferase. | 0.417 |
puuR | clgR | OXPF_33590 | OXPF_25300 | HTH-type transcriptional regulator PuuR. | Transcriptional regulator ClgR. | 0.542 |
puuR | ywnH_2 | OXPF_33590 | OXPF_19220 | HTH-type transcriptional regulator PuuR. | Putative phosphinothricin acetyltransferase YwnH. | 0.417 |
ywnH_2 | KPU45863.1 | OXPF_19220 | OXPF_03310 | Putative phosphinothricin acetyltransferase YwnH. | Putative acetyltransferase. | 0.673 |
ywnH_2 | clgR | OXPF_19220 | OXPF_25300 | Putative phosphinothricin acetyltransferase YwnH. | Transcriptional regulator ClgR. | 0.417 |
ywnH_2 | doeB | OXPF_19220 | OXPF_20410 | Putative phosphinothricin acetyltransferase YwnH. | N-alpha-acetyl-L-2,4-diaminobutyric acid deacetylase. | 0.433 |
ywnH_2 | puuR | OXPF_19220 | OXPF_33590 | Putative phosphinothricin acetyltransferase YwnH. | HTH-type transcriptional regulator PuuR. | 0.417 |