KPU43904.1 protein (Oxobacter pfennigii) - STRING interaction network

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Score

KPU43904.1

Hypothetical protein. (91 aa)

Predicted Functional Partners:

rplGA

0.988

nusA

0.984

rimP

0.977

infB

0.976

rbfA

0.892

truB

0.881

rplGB

0.815

ribF

0.812

nrnA_1

0.783

pnp

0.778

Your Current Organism:

Oxobacter pfennigii

NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KPU43904.1	infB	OXPF_20690	OXPF_20670	Hypothetical protein.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.976
KPU43904.1	nrnA_1	OXPF_20690	OXPF_20650	Hypothetical protein.	Bifunctional oligoribonuclease and PAP phosphatase NrnA.	0.783
KPU43904.1	nusA	OXPF_20690	OXPF_20700	Hypothetical protein.	Hypothetical protein; Participates in both transcription termination and antitermination.	0.984
KPU43904.1	pnp	OXPF_20690	OXPF_20610	Hypothetical protein.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.778
KPU43904.1	rbfA	OXPF_20690	OXPF_20660	Hypothetical protein.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.892
KPU43904.1	ribF	OXPF_20690	OXPF_20630	Hypothetical protein.	Riboflavin biosynthesis protein RibF; Belongs to the ribF family.	0.812
KPU43904.1	rimP	OXPF_20690	OXPF_20710	Hypothetical protein.	Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.977
KPU43904.1	rplGA	OXPF_20690	OXPF_20680	Hypothetical protein.	Putative ribosomal protein YlxQ.	0.988
KPU43904.1	rplGB	OXPF_20690	OXPF_38140	Hypothetical protein.	Ribosome-associated protein L7Ae-like protein.	0.815
KPU43904.1	truB	OXPF_20690	OXPF_20640	Hypothetical protein.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.881
infB	KPU43904.1	OXPF_20670	OXPF_20690	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Hypothetical protein.	0.976
infB	nrnA_1	OXPF_20670	OXPF_20650	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Bifunctional oligoribonuclease and PAP phosphatase NrnA.	0.900
infB	nusA	OXPF_20670	OXPF_20700	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Hypothetical protein; Participates in both transcription termination and antitermination.	0.996
infB	pnp	OXPF_20670	OXPF_20610	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.964
infB	rbfA	OXPF_20670	OXPF_20660	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.987
infB	ribF	OXPF_20670	OXPF_20630	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Riboflavin biosynthesis protein RibF; Belongs to the ribF family.	0.840
infB	rimP	OXPF_20670	OXPF_20710	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.962
infB	rplGA	OXPF_20670	OXPF_20680	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Putative ribosomal protein YlxQ.	0.997
infB	rplGB	OXPF_20670	OXPF_38140	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Ribosome-associated protein L7Ae-like protein.	0.978
infB	truB	OXPF_20670	OXPF_20640	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.997