Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ideR | mntB_1 | OXPF_25720 | OXPF_25750 | Iron-dependent repressor IdeR. | Manganese transport system membrane protein MntB. | 0.822 |
ideR | mntB_2 | OXPF_25720 | OXPF_25760 | Iron-dependent repressor IdeR. | Manganese transport system membrane protein MntB. | 0.979 |
ideR | troA | OXPF_25720 | OXPF_25730 | Iron-dependent repressor IdeR. | Periplasmic zinc-binding protein TroA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.879 |
ideR | znuA_1 | OXPF_25720 | OXPF_06480 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.440 |
ideR | znuA_2 | OXPF_25720 | OXPF_25630 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.440 |
ideR | znuB_2 | OXPF_25720 | OXPF_25650 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system membrane protein ZnuB. | 0.429 |
ideR | znuC_1 | OXPF_25720 | OXPF_06490 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.439 |
ideR | znuC_2 | OXPF_25720 | OXPF_25640 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.439 |
ideR | znuC_3 | OXPF_25720 | OXPF_25740 | Iron-dependent repressor IdeR. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.839 |
lytB_2 | mntB_1 | OXPF_12740 | OXPF_25750 | Amidase enhancer precursor. | Manganese transport system membrane protein MntB. | 0.807 |
lytB_2 | mntB_2 | OXPF_12740 | OXPF_25760 | Amidase enhancer precursor. | Manganese transport system membrane protein MntB. | 0.807 |
lytB_2 | troA | OXPF_12740 | OXPF_25730 | Amidase enhancer precursor. | Periplasmic zinc-binding protein TroA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.663 |
lytB_2 | znuA_1 | OXPF_12740 | OXPF_06480 | Amidase enhancer precursor. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.663 |
lytB_2 | znuA_2 | OXPF_12740 | OXPF_25630 | Amidase enhancer precursor. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.663 |
lytB_2 | znuB_2 | OXPF_12740 | OXPF_25650 | Amidase enhancer precursor. | High-affinity zinc uptake system membrane protein ZnuB. | 0.807 |
lytB_2 | znuC_1 | OXPF_12740 | OXPF_06490 | Amidase enhancer precursor. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.848 |
lytB_2 | znuC_2 | OXPF_12740 | OXPF_25640 | Amidase enhancer precursor. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.848 |
lytB_2 | znuC_3 | OXPF_12740 | OXPF_25740 | Amidase enhancer precursor. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.848 |
mntB_1 | ideR | OXPF_25750 | OXPF_25720 | Manganese transport system membrane protein MntB. | Iron-dependent repressor IdeR. | 0.822 |
mntB_1 | lytB_2 | OXPF_25750 | OXPF_12740 | Manganese transport system membrane protein MntB. | Amidase enhancer precursor. | 0.807 |
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