STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpA_2V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (589 aa)    
Predicted Functional Partners:
ntpD
V-type sodium ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpH_2
ATP synthase subunit c; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
ntpB_3
V-type sodium ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
0.999
atpD_2
V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
KPU43783.1
V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.998
atpD_1
V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.997
atpC_2
V-type ATP synthase subunit C.
 
 0.997
atpF_2
V-type ATP synthase subunit F.
 
 0.997
atpE_4
V-type proton ATPase subunit E.
  
 0.997
KPU46247.1
V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.996
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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