STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsE_2Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)    
Predicted Functional Partners:
ftsX_2
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.992
ftsX_1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.964
macB_6
Macrolide export ATP-binding/permease protein MacB.
 
    
 0.903
macB_7
Macrolide export ATP-binding/permease protein MacB.
 
    
 0.901
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
    
 0.899
oppD_4
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
    
0.897
ftsE_1
Cell division ATP-binding protein FtsE.
  
  
 
0.811
drrA_5
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
    
0.796
oppD_3
Oligopeptide transport ATP-binding protein OppD.
 
    
0.780
mepM_4
Murein DD-endopeptidase MepM.
 
   
 0.765
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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