STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU43437.1Gluconeogenesis factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (437 aa)    
Predicted Functional Partners:
KPU43436.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
  
  
 0.975
whiA
Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation.
  
  
 0.965
polX_2
DNA polymerase/3'-5' exonuclease PolX.
       0.843
KPU42679.1
F420-0:gamma-glutamyl ligase.
  
 
 0.808
stp_2
Serine/threonine phosphatase stp.
  
  
 0.769
thiH
2-iminoacetate synthase.
    
 0.721
KPU43439.1
Cobalt-dependent inorganic pyrophosphatase.
       0.666
yvhJ
Putative transcriptional regulator YvhJ.
  
     0.611
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.597
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.507
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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