Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU43490.1 | ubiE_3 | OXPF_29310 | OXPF_29320 | Aspartate racemase. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.410 |
KPU43492.1 | ubiE_3 | OXPF_29330 | OXPF_29320 | Hypothetical protein. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.489 |
KPU43539.1 | ubiE_3 | OXPF_29800 | OXPF_29320 | 3-demethylubiquinone-9 3-methyltransferase. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.481 |
KPU44808.1 | ubiE_3 | OXPF_18940 | OXPF_29320 | Hypothetical protein. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.486 |
KPU45952.1 | ubiE_3 | OXPF_04320 | OXPF_29320 | Hypothetical protein. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.608 |
bioB_1 | gcvT | OXPF_11000 | OXPF_04540 | Biotin synthase. | Aminomethyltransferase. | 0.461 |
bioB_1 | ubiE_3 | OXPF_11000 | OXPF_29320 | Biotin synthase. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.449 |
gcvT | bioB_1 | OXPF_04540 | OXPF_11000 | Aminomethyltransferase. | Biotin synthase. | 0.461 |
gcvT | hndC_3 | OXPF_04540 | OXPF_04880 | Aminomethyltransferase. | NADP-reducing hydrogenase subunit HndC. | 0.767 |
gcvT | puuB | OXPF_04540 | OXPF_26620 | Aminomethyltransferase. | Gamma-glutamylputrescine oxidoreductase. | 0.994 |
gcvT | ubiE_3 | OXPF_04540 | OXPF_29320 | Aminomethyltransferase. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.697 |
hndC_3 | gcvT | OXPF_04880 | OXPF_04540 | NADP-reducing hydrogenase subunit HndC. | Aminomethyltransferase. | 0.767 |
hndC_3 | puuB | OXPF_04880 | OXPF_26620 | NADP-reducing hydrogenase subunit HndC. | Gamma-glutamylputrescine oxidoreductase. | 0.974 |
hndC_3 | ubiE_3 | OXPF_04880 | OXPF_29320 | NADP-reducing hydrogenase subunit HndC. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.584 |
puuB | gcvT | OXPF_26620 | OXPF_04540 | Gamma-glutamylputrescine oxidoreductase. | Aminomethyltransferase. | 0.994 |
puuB | hndC_3 | OXPF_26620 | OXPF_04880 | Gamma-glutamylputrescine oxidoreductase. | NADP-reducing hydrogenase subunit HndC. | 0.974 |
puuB | ubiE_3 | OXPF_26620 | OXPF_29320 | Gamma-glutamylputrescine oxidoreductase. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 0.470 |
ubiE_3 | KPU43490.1 | OXPF_29320 | OXPF_29310 | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | Aspartate racemase. | 0.410 |
ubiE_3 | KPU43492.1 | OXPF_29320 | OXPF_29330 | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | Hypothetical protein. | 0.489 |
ubiE_3 | KPU43539.1 | OXPF_29320 | OXPF_29800 | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE. | 3-demethylubiquinone-9 3-methyltransferase. | 0.481 |
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