STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU43578.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
fldI_3
R-phenyllactate dehydratase activator.
     0.993
fldI_2
R-phenyllactate dehydratase activator.
     0.975
KPU43577.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
   
0.917
fldI_1
R-phenyllactate dehydratase activator.
     0.746
fdhF_3
Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.528
sfrA_3
NADPH-Fe(3+) oxidoreductase subunit alpha.
       0.435
hgdC
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
 
   
0.409
KPU46050.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
   
0.402
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.