Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU44557.1 | cheV | OXPF_16400 | OXPF_30010 | Blue-light-activated protein. | Chemotaxis protein CheV. | 0.989 |
KPU44557.1 | gmr_3 | OXPF_16400 | OXPF_38300 | Blue-light-activated protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.967 |
KPU44557.1 | kinE_1 | OXPF_16400 | OXPF_07110 | Blue-light-activated protein. | Sporulation kinase E. | 0.995 |
KPU44557.1 | pknB | OXPF_16400 | OXPF_31460 | Blue-light-activated protein. | Serine/threonine-protein kinase PknB. | 0.998 |
KPU44557.1 | rpfC_1 | OXPF_16400 | OXPF_25570 | Blue-light-activated protein. | Sensory/regulatory protein RpfC. | 0.996 |
KPU44557.1 | todS_1 | OXPF_16400 | OXPF_09860 | Blue-light-activated protein. | Sensor histidine kinase TodS. | 0.995 |
KPU44557.1 | walR_1 | OXPF_16400 | OXPF_04960 | Blue-light-activated protein. | Transcriptional regulatory protein WalR. | 0.712 |
KPU44557.1 | yegE | OXPF_16400 | OXPF_00810 | Blue-light-activated protein. | Putative diguanylate cyclase YegE. | 0.960 |
KPU44557.1 | yycG_7 | OXPF_16400 | OXPF_29410 | Blue-light-activated protein. | Sensor histidine kinase YycG. | 0.996 |
KPU44557.1 | zraS | OXPF_16400 | OXPF_30830 | Blue-light-activated protein. | Sensor protein ZraS. | 0.997 |
cheV | KPU44557.1 | OXPF_30010 | OXPF_16400 | Chemotaxis protein CheV. | Blue-light-activated protein. | 0.989 |
cheV | gmr_3 | OXPF_30010 | OXPF_38300 | Chemotaxis protein CheV. | Cyclic di-GMP phosphodiesterase Gmr. | 0.995 |
cheV | kinE_1 | OXPF_30010 | OXPF_07110 | Chemotaxis protein CheV. | Sporulation kinase E. | 0.996 |
cheV | pknB | OXPF_30010 | OXPF_31460 | Chemotaxis protein CheV. | Serine/threonine-protein kinase PknB. | 0.997 |
cheV | rpfC_1 | OXPF_30010 | OXPF_25570 | Chemotaxis protein CheV. | Sensory/regulatory protein RpfC. | 0.997 |
cheV | todS_1 | OXPF_30010 | OXPF_09860 | Chemotaxis protein CheV. | Sensor histidine kinase TodS. | 0.987 |
cheV | walR_1 | OXPF_30010 | OXPF_04960 | Chemotaxis protein CheV. | Transcriptional regulatory protein WalR. | 0.521 |
cheV | yegE | OXPF_30010 | OXPF_00810 | Chemotaxis protein CheV. | Putative diguanylate cyclase YegE. | 0.988 |
cheV | yycG_7 | OXPF_30010 | OXPF_29410 | Chemotaxis protein CheV. | Sensor histidine kinase YycG. | 0.994 |
cheV | zraS | OXPF_30010 | OXPF_30830 | Chemotaxis protein CheV. | Sensor protein ZraS. | 0.998 |
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