STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ohrR_5Organic hydroperoxide resistance transcriptional regulator. (144 aa)    
Predicted Functional Partners:
KPU43179.1
Flavodoxin.
 
     0.812
KPU43181.1
Hypothetical protein; Glutathione peroxidase homolog BsaA; Belongs to the glutathione peroxidase family.
 
  
 0.727
ohrR_1
Organic hydroperoxide resistance transcriptional regulator.
  
     0.685
opuCC
Carnitine transport binding protein OpuCC precursor.
  
  
 0.508
pknB
Serine/threonine-protein kinase PknB.
  
 
 0.458
cdr
Coenzyme A disulfide reductase.
  
  
 0.450
KPU44547.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.450
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.