STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU43126.1Putative ABC transporter ATP-binding protein. (606 aa)    
Predicted Functional Partners:
KPU42930.1
Putative ABC transporter ATP-binding protein.
 
     
0.891
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
     
0.885
ecfA1
Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.873
KPU43127.1
Putative ABC transporter ATP-binding protein.
 
    
0.821
hosA_2
Transcriptional regulator HosA.
 
   
 0.806
ecfA3
Energy-coupling factor transporter ATP-binding protein EcfA3; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
   
 
0.596
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
     
0.544
spoVK
Stage V sporulation protein K.
   
 0.534
purD_2
Phosphoribosylamine--glycine ligase.
   
 0.435
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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