Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KPU43135.1 | KPU43136.1 | OXPF_33850 | OXPF_33860 | Hypothetical protein. | Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. | 0.628 |
| KPU43135.1 | metH_22 | OXPF_33850 | OXPF_33870 | Hypothetical protein. | Methionine synthase. | 0.495 |
| KPU43135.1 | yciC | OXPF_33850 | OXPF_33840 | Hypothetical protein. | Putative metal chaperone YciC. | 0.773 |
| KPU43136.1 | KPU43135.1 | OXPF_33860 | OXPF_33850 | Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. | Hypothetical protein. | 0.628 |
| KPU43136.1 | metH_22 | OXPF_33860 | OXPF_33870 | Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. | Methionine synthase. | 0.710 |
| KPU43136.1 | yciC | OXPF_33860 | OXPF_33840 | Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. | Putative metal chaperone YciC. | 0.655 |
| lytB_2 | rpsZ | OXPF_12740 | OXPF_37950 | Amidase enhancer precursor. | 30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.410 |
| lytB_2 | yciC | OXPF_12740 | OXPF_33840 | Amidase enhancer precursor. | Putative metal chaperone YciC. | 0.520 |
| lytB_2 | znuA_1 | OXPF_12740 | OXPF_06480 | Amidase enhancer precursor. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.663 |
| lytB_2 | znuA_2 | OXPF_12740 | OXPF_25630 | Amidase enhancer precursor. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.663 |
| mapB | rpsZ | OXPF_27420 | OXPF_37950 | Methionine aminopeptidase 2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.964 |
| mapB | yciC | OXPF_27420 | OXPF_33840 | Methionine aminopeptidase 2; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Putative metal chaperone YciC. | 0.548 |
| metH_22 | KPU43135.1 | OXPF_33870 | OXPF_33850 | Methionine synthase. | Hypothetical protein. | 0.495 |
| metH_22 | KPU43136.1 | OXPF_33870 | OXPF_33860 | Methionine synthase. | Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. | 0.710 |
| metH_22 | yciC | OXPF_33870 | OXPF_33840 | Methionine synthase. | Putative metal chaperone YciC. | 0.541 |
| rpmB | rpsZ | OXPF_21330 | OXPF_37950 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.992 |
| rpmB | yciC | OXPF_21330 | OXPF_33840 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Putative metal chaperone YciC. | 0.574 |
| rpmB | znuA_1 | OXPF_21330 | OXPF_06480 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.577 |
| rpmB | znuA_2 | OXPF_21330 | OXPF_25630 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.577 |
| rpsZ | lytB_2 | OXPF_37950 | OXPF_12740 | 30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | Amidase enhancer precursor. | 0.410 |
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