Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dxs_3 | glpX_1 | OXPF_34750 | OXPF_16870 | 1-deoxy-D-xylulose-5-phosphate synthase. | Fructose-1,6-bisphosphatase class 2. | 0.805 |
dxs_3 | glpX_2 | OXPF_34750 | OXPF_23600 | 1-deoxy-D-xylulose-5-phosphate synthase. | Fructose-1,6-bisphosphatase class 2; Belongs to the FBPase class 2 family. | 0.805 |
dxs_3 | mtnW | OXPF_34750 | OXPF_34740 | 1-deoxy-D-xylulose-5-phosphate synthase. | 2,3-diketo-5-methylthiopentyl-1-phosphate enolase. | 0.897 |
dxs_3 | nifJ_1 | OXPF_34750 | OXPF_30990 | 1-deoxy-D-xylulose-5-phosphate synthase. | Pyruvate-flavodoxin oxidoreductase. | 0.808 |
dxs_3 | nifJ_2 | OXPF_34750 | OXPF_36080 | 1-deoxy-D-xylulose-5-phosphate synthase. | Pyruvate-flavodoxin oxidoreductase. | 0.818 |
dxs_3 | rpe | OXPF_34750 | OXPF_21360 | 1-deoxy-D-xylulose-5-phosphate synthase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.932 |
dxs_3 | tal | OXPF_34750 | OXPF_07540 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.790 |
dxs_3 | tkt | OXPF_34750 | OXPF_34760 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase. | 0.999 |
dxs_3 | tktA | OXPF_34750 | OXPF_09060 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.999 |
dxs_3 | ywlF | OXPF_34750 | OXPF_17000 | 1-deoxy-D-xylulose-5-phosphate synthase. | Putative sugar phosphate isomerase YwlF. | 0.865 |
glpX_1 | dxs_3 | OXPF_16870 | OXPF_34750 | Fructose-1,6-bisphosphatase class 2. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.805 |
glpX_1 | rpe | OXPF_16870 | OXPF_21360 | Fructose-1,6-bisphosphatase class 2. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.581 |
glpX_1 | tal | OXPF_16870 | OXPF_07540 | Fructose-1,6-bisphosphatase class 2. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.797 |
glpX_1 | tkt | OXPF_16870 | OXPF_34760 | Fructose-1,6-bisphosphatase class 2. | Transketolase. | 0.805 |
glpX_1 | tktA | OXPF_16870 | OXPF_09060 | Fructose-1,6-bisphosphatase class 2. | Transketolase 1. | 0.926 |
glpX_2 | dxs_3 | OXPF_23600 | OXPF_34750 | Fructose-1,6-bisphosphatase class 2; Belongs to the FBPase class 2 family. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.805 |
glpX_2 | rpe | OXPF_23600 | OXPF_21360 | Fructose-1,6-bisphosphatase class 2; Belongs to the FBPase class 2 family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.581 |
glpX_2 | tal | OXPF_23600 | OXPF_07540 | Fructose-1,6-bisphosphatase class 2; Belongs to the FBPase class 2 family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.797 |
glpX_2 | tkt | OXPF_23600 | OXPF_34760 | Fructose-1,6-bisphosphatase class 2; Belongs to the FBPase class 2 family. | Transketolase. | 0.805 |
glpX_2 | tktA | OXPF_23600 | OXPF_09060 | Fructose-1,6-bisphosphatase class 2; Belongs to the FBPase class 2 family. | Transketolase 1. | 0.912 |
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