STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yugIGeneral stress protein 13. (141 aa)    
Predicted Functional Partners:
ftsL_2
Cell division protein FtsL.
  
  
 0.880
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
    
  0.818
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
    
  0.818
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.788
KPU42775.1
Hypothetical protein.
       0.773
yabQ
Spore protein YabQ.
     
 0.724
yabP
Spore protein YabP.
     
 0.686
gppA_1
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.
       0.630
ldhA
L-lactate dehydrogenase 1.
  
 
  0.624
pgiB
Glucose-6-phosphate isomerase B; Belongs to the GPI family.
    
  0.609
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.