Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hslR | hup_2 | OXPF_35420 | OXPF_35430 | Heat shock protein 15. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.807 |
| hslR | mazG | OXPF_35420 | OXPF_35440 | Heat shock protein 15. | Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. | 0.808 |
| hslR | rplS | OXPF_35420 | OXPF_20950 | Heat shock protein 15. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.948 |
| hslR | rpmF | OXPF_35420 | OXPF_21160 | Heat shock protein 15. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.895 |
| hslR | spoVB_2 | OXPF_35420 | OXPF_35450 | Heat shock protein 15. | Stage V sporulation protein B. | 0.558 |
| hslR | yabQ | OXPF_35420 | OXPF_35400 | Heat shock protein 15. | Spore protein YabQ. | 0.819 |
| hup_2 | hslR | OXPF_35430 | OXPF_35420 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Heat shock protein 15. | 0.807 |
| hup_2 | mazG | OXPF_35430 | OXPF_35440 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. | 0.599 |
| hup_2 | pheA | OXPF_35430 | OXPF_18710 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | P-protein. | 0.587 |
| hup_2 | rplL | OXPF_35430 | OXPF_38170 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.613 |
| hup_2 | rplS | OXPF_35430 | OXPF_20950 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.593 |
| hup_2 | rpmF | OXPF_35430 | OXPF_21160 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.569 |
| hup_2 | rpsO | OXPF_35430 | OXPF_20620 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.684 |
| hup_2 | rpsT | OXPF_35430 | OXPF_22990 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.756 |
| hup_2 | spoVB_2 | OXPF_35430 | OXPF_35450 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Stage V sporulation protein B. | 0.556 |
| hup_2 | yabQ | OXPF_35430 | OXPF_35400 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Spore protein YabQ. | 0.717 |
| mazG | hslR | OXPF_35440 | OXPF_35420 | Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. | Heat shock protein 15. | 0.808 |
| mazG | hup_2 | OXPF_35440 | OXPF_35430 | Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.599 |
| mazG | spoVB_2 | OXPF_35440 | OXPF_35450 | Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. | Stage V sporulation protein B. | 0.777 |
| mazG | yabQ | OXPF_35440 | OXPF_35400 | Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG. | Spore protein YabQ. | 0.545 |
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