STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU42157.1Hypothetical protein. (595 aa)    
Predicted Functional Partners:
KPU42155.1
Phage late control protein D.
 
     0.951
KPU42151.1
Baseplate J-like protein.
 
     0.945
KPU42150.1
Phage tail protein (tail_P2_I).
 
    0.941
KPU42160.1
Hypothetical protein.
 
    0.882
KPU42159.1
Phage tail tube protein FII.
 
     0.879
KPU42167.1
Phage portal protein, lambda family.
 
     0.853
KPU42169.1
Phage terminase large subunit (GpA).
 
     0.851
KPU42149.1
Hypothetical protein.
   
   0.845
KPU45824.1
Hypothetical protein.
  
 
 0.841
KPU42165.1
Mu-like prophage major head subunit gpT.
 
     0.821
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.