STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU42288.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
pspC
Phage shock protein C.
  
    0.906
liaS
Sensor histidine kinase LiaS.
  
  
 0.806
prkC
Serine/threonine-protein kinase PrkC.
  
    0.567
KPU45350.1
Hypothetical protein.
  
  
 0.554
KPU43197.1
Hypothetical protein.
  
  
 0.554
KPU42285.1
SpoVR family protein.
       0.441
KPU42286.1
Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family.
       0.441
KPU42287.1
PrkA AAA domain protein.
       0.441
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.437
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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