Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPU42460.1 | KPU42462.1 | OXPF_42450 | OXPF_42470 | Hypothetical protein. | Fatty acid-binding protein. | 0.543 |
KPU42460.1 | katA | OXPF_42450 | OXPF_42440 | Hypothetical protein. | Catalase. | 0.420 |
KPU42460.1 | mdlD | OXPF_42450 | OXPF_42480 | Hypothetical protein. | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.430 |
KPU42460.1 | sigM_3 | OXPF_42450 | OXPF_42460 | Hypothetical protein. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
KPU42462.1 | KPU42460.1 | OXPF_42470 | OXPF_42450 | Fatty acid-binding protein. | Hypothetical protein. | 0.543 |
KPU42462.1 | mdlD | OXPF_42470 | OXPF_42480 | Fatty acid-binding protein. | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.596 |
KPU42462.1 | sigM_3 | OXPF_42470 | OXPF_42460 | Fatty acid-binding protein. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.543 |
katA | KPU42460.1 | OXPF_42440 | OXPF_42450 | Catalase. | Hypothetical protein. | 0.420 |
katA | mdlD | OXPF_42440 | OXPF_42480 | Catalase. | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.475 |
katA | sigM_3 | OXPF_42440 | OXPF_42460 | Catalase. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.446 |
mdlD | KPU42460.1 | OXPF_42480 | OXPF_42450 | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.430 |
mdlD | KPU42462.1 | OXPF_42480 | OXPF_42470 | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Fatty acid-binding protein. | 0.596 |
mdlD | katA | OXPF_42480 | OXPF_42440 | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Catalase. | 0.475 |
mdlD | sigM_3 | OXPF_42480 | OXPF_42460 | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | 0.430 |
sigM_3 | KPU42460.1 | OXPF_42460 | OXPF_42450 | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
sigM_3 | KPU42462.1 | OXPF_42460 | OXPF_42470 | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | Fatty acid-binding protein. | 0.543 |
sigM_3 | katA | OXPF_42460 | OXPF_42440 | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | Catalase. | 0.446 |
sigM_3 | mdlD | OXPF_42460 | OXPF_42480 | RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. | NAD(P)-dependent benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.430 |