STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAP43099.1Conjugal transfer protein TrbB; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)    
Predicted Functional Partners:
OAP43102.1
Conjugal transfer protein TrbE; Type IV secretion system VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.950
OAP43100.1
Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
OAP43101.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
OAP43103.1
Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.935
OAP43107.1
Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.934
OAP43108.1
Conjugal transfer protein TraI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.932
OAP43106.1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.931
OAP43105.1
Conjugal transfer protein TrbL; Type IV secretion VirB6 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.929
OAP39579.1
Pilus assembly protein TadB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.849
OAP43109.1
Small protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.839
Your Current Organism:
Sinorhizobium saheli
NCBI taxonomy Id: 36856
Other names: ATCC 51690, DSM 11273, Ensifer saheli, HAMBI 215, ICMP 13648, LMG 7837, LMG:7837, NBRC 100386, ORS 609, S. saheli, Sinorhizobium sp. HAMBI1496
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