STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAP44656.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)    
Predicted Functional Partners:
OAP45023.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.659
fliE
Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.569
OAP45386.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.540
OAP44657.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
OAP43396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
mltG
4-amino-4-deoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.493
OAP43414.1
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
OAP44999.1
Flagellar biosynthesis protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.482
OAP38759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.477
ATB98_11750
Peptidase M24; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.475
Your Current Organism:
Sinorhizobium saheli
NCBI taxonomy Id: 36856
Other names: ATCC 51690, DSM 11273, Ensifer saheli, HAMBI 215, ICMP 13648, LMG 7837, LMG:7837, NBRC 100386, ORS 609, S. saheli, Sinorhizobium sp. HAMBI1496
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