Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATB98_02790 | OAP49368.1 | ATB98_02790 | ATB98_20255 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.748 |
OAP34182.1 | OAP49368.1 | ATB98_22915 | ATB98_20255 | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OAP44202.1 | OAP49368.1 | ATB98_16160 | ATB98_20255 | HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
OAP49368.1 | ATB98_02790 | ATB98_20255 | ATB98_02790 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.748 |
OAP49368.1 | OAP34182.1 | ATB98_20255 | ATB98_22915 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
OAP49368.1 | OAP44202.1 | ATB98_20255 | ATB98_16160 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
OAP49368.1 | OAP49369.1 | ATB98_20255 | ATB98_20260 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
OAP49369.1 | OAP49368.1 | ATB98_20260 | ATB98_20255 | Chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |