STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU08371.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)    
Predicted Functional Partners:
OBU05677.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.737
OBU09274.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.726
OBU05703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.547
OBU05699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.519
OBU05702.1
Acyl carrier protein; Carries the fatty acid chain in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.465
OBU05709.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
OBU05711.1
3-hydroxy-fatty acyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
OBU05712.1
beta-ketoacyl-ACP synthase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.416
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
     
 0.404
OBU05707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.402
Your Current Organism:
Morganella psychrotolerans
NCBI taxonomy Id: 368603
Other names: DSM 17886, JCM 16473, LMG 23374, LMG:23374, Morganella psychrotolerans Emborg et al. 2006, strain U2/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.