STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU05527.1Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)    
Predicted Functional Partners:
AYY16_09805
Fimbrial protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.971
OBU05528.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.968
OBU05420.1
PapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.900
OBU05518.1
Fimbria A protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.891
OBU08976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.880
OBU09103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.880
OBU05402.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.880
OBU05419.1
Fimbriae usher protein StfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.880
OBU05764.1
Usher protein FimD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.880
OBU05519.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.880
Your Current Organism:
Morganella psychrotolerans
NCBI taxonomy Id: 368603
Other names: DSM 17886, JCM 16473, LMG 23374, LMG:23374, Morganella psychrotolerans Emborg et al. 2006, strain U2/3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.