STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU05537.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (124 aa)    
Predicted Functional Partners:
OBU05536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
OBU03695.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
OBU09019.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.513
OBU09075.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.491
OBU05519.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
OBU05419.1
Fimbriae usher protein StfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
OBU02877.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.420
OBU08500.1
Addiction module protein; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.
     
 0.414
AYY16_09805
Fimbrial protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
OBU09018.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.408
Your Current Organism:
Morganella psychrotolerans
NCBI taxonomy Id: 368603
Other names: DSM 17886, JCM 16473, LMG 23374, LMG:23374, Morganella psychrotolerans Emborg et al. 2006, strain U2/3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.