STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU05688.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)    
Predicted Functional Partners:
OBU08503.1
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.740
OBU05689.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.659
OBU08564.1
Mononuclear molybdenum enzyme YedY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
OBU05691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.505
OBU05690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.478
nirD
Nitrite reductase small subunit; Involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.410
Your Current Organism:
Morganella psychrotolerans
NCBI taxonomy Id: 368603
Other names: DSM 17886, JCM 16473, LMG 23374, LMG:23374, Morganella psychrotolerans Emborg et al. 2006, strain U2/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.