STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ34_00610Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
HQ34_00615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
DltB_2
Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family.
 
    0.873
HQ34_06200
Peptidase S74; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.646
YfdG
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
HQ34_00625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
HQ34_06940
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
HQ34_05785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
HQ34_04350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.403
Your Current Organism:
Porphyromonas cangingivalis
NCBI taxonomy Id: 36874
Other names: ATCC 700135, CCUG 47700, JCM 15983, NCTC 12856, P. cangingivalis, VPB 4874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.