STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ34_06910Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1037 aa)    
Predicted Functional Partners:
HQ34_06905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.838
HQ34_03795
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
HQ34_09520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
AaxB
Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
HQ34_05720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
Your Current Organism:
Porphyromonas cangingivalis
NCBI taxonomy Id: 36874
Other names: ATCC 700135, CCUG 47700, JCM 15983, NCTC 12856, P. cangingivalis, VPB 4874
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.