STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ29_01850Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)    
Predicted Functional Partners:
HQ29_08175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.973
HQ29_09050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.937
HQ29_01840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.777
HQ29_01845
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
HQ29_04480
Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.644
HQ29_01745
Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.620
HQ29_08830
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.603
HQ29_01835
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.583
HQ29_08190
UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.557
HQ29_08165
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.528
Your Current Organism:
Porphyromonas canoris
NCBI taxonomy Id: 36875
Other names: CCUG 36550, CIP 104881, JCM 16132, NCTC 12835, P. canoris, VPB 4878
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.