STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ29_0209050S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
HQ29_02105
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
HQ29_02095
50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
HQ29_02100
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
HQ29_02110
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
HQ29_02150
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
HQ29_02180
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
HQ29_02185
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
HQ29_02050
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
HQ29_02085
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
HQ29_02115
30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
Your Current Organism:
Porphyromonas canoris
NCBI taxonomy Id: 36875
Other names: CCUG 36550, CIP 104881, JCM 16132, NCTC 12835, P. canoris, VPB 4878
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