STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ29_029353-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
HQ29_01910
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.988
HQ29_10110
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
HQ29_03295
Racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.978
HQ29_04780
hydroxymyristoyl-ACP dehydratase; Catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
HQ29_10300
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.955
HQ29_09675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.933
HQ29_02515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.910
HQ29_03935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.904
HQ29_03455
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.897
HQ29_01760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.875
Your Current Organism:
Porphyromonas canoris
NCBI taxonomy Id: 36875
Other names: CCUG 36550, CIP 104881, JCM 16132, NCTC 12835, P. canoris, VPB 4878
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.