STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ29_03450Deoxyuridine 5'-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
HQ29_05535
Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
HQ29_09185
Ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.931
HQ29_10050
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.930
HQ29_02510
Response regulator SirA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.928
HQ29_09600
Phosphopantothenoylcysteine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.927
HQ29_00520
CMP deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.907
HQ29_09615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.809
HQ29_03445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.733
HQ29_03455
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
HQ29_03460
TIM-barrel enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.669
Your Current Organism:
Porphyromonas canoris
NCBI taxonomy Id: 36875
Other names: CCUG 36550, CIP 104881, JCM 16132, NCTC 12835, P. canoris, VPB 4878
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.